palmwtc

Automated whole-tree chamber workflow for oil-palm ecophysiology.

palmwtc is the data-processing and analysis pipeline for the first automated whole-tree chamber (WTC) sized to enclose individual oil palm trees, deployed at the LIBZ field site (Riau, Indonesia) and instrumented with LI-COR LI-850 gas analyzers.

It transforms raw chamber cycles into validated CO₂ and H₂O fluxes, applies multi-stage quality control (rules + breakpoints + ML outliers), and produces inputs for the XPalm digital-twin calibration pipeline.

Getting Started

• Quickstart — your first flux number in 3 minutes

Tutorials

• Tutorials

Science Reference

• Science Reference

Quick links

• Quickstart — install, run on the bundled sample, see results

• Tutorials — step-by-step walkthroughs of each pipeline stage

• Science Reference — methods, validation thresholds, literature

• API Reference — auto-generated from docstrings

Cite

If you use palmwtc in scientific work, please cite the Zenodo DOI for the release you used. See the Citation File.